Human Disease

Management

Publications

Our publications and citations can be available at below

2017

26. Manzoor, H.#, I. Bukhari, M. Wajid, Y. Zhang, H. Zhang, N. Bruggemann, C. Klein, Q. Shi* and S. Naz* (2017). A Novel APTX Variant and Ataxia with Oculomotor Apraxia Type 1. J Clin Neurol 13(3): 303-305. (IF= 2.593) [pubmed][PDF]

25. Li, G.#, F. Iqbal#, L. Wang, Z. Xu, X. Che, W. Yu, L. Shi, T. Guo, G. Zhou, X. Jiang, H. Zhang, Y. Zhang* and D. Yu* (2017). Meiotic defects and decreased expression of genes located around the chromosomal breakpoint in the testis of a patient with a novel 46,X,t(Y;1)(p11.3;p31) translocation. Int J Mol Med 40(2): 367-377. (IF= 2.341) [pubmed][PDF]

24. Jiang, L.#, T. Li#, X. Zhang, B. Zhang, C. Yu, Y. Li, S. Fan, X. Jiang, T. Khan, Q. Hao, P. Xu, D. Nadano, M. Huleihel, E. Lunenfeld, P. J. Wang, Y. Zhang* and Q. Shi* (2017). RPL10L Is Required for Male Meiotic Division by Compensating for RPL10 during Meiotic Sex Chromosome Inactivation in Mice. Curr Biol 27(10): 1498-1505 e1496. (IF=8.851) [pubmed][PDF]

23. Bukhari, I.#, G. Li#, L. Wang, F. Iqbal, H. Zhang, J. Zhu, H. Liu, X. Fang, N. M. Al-Daghri, H. J. Cooke, Y. Zhang* and X. Jiang* (2017). Effects of androgen receptor mutation on testicular histopathology of patient having complete androgen insensitivity. J Mol Histol 48(3): 159-167. (IF= 2.362) [pubmed][PDF]

22. Changlin Wan, Jianing Gao, Huan Zhang, Xiaohua Jiang, Qiguang Zang2, Rongjun Ban1, Yuanwei Zhang,* and Qinghua Shi,*. CPSS 2.0: a computational platform update for the analysis of small RNA sequencing data. Bioinformatics. 2017 Feb 8. doi: 10.1093/bioinformatics/btx066. (IF=7.307) [pubmed][PDF]

2016

21. Zhang, Y.#, Q. Zang#, H. Zhang#, R. Ban, Y. Yang, F. Iqbal, A. Li* and Q. Shi* (2016). DeAnnIso: a tool for online detection and annotation of isomiRs from small RNA sequencing data. Nucleic Acids Res 44(W1): W166-175. (IF=10.162) [pubmed][PDF]

20. Zhang, Y.#, Q. Zang#, B. Xu, W. Zheng, R. Ban, H. Zhang, Y. Yang, Q. Hao, F. Iqbal, A. Li* and Q. Shi* (2016). IsomiR Bank: a research resource for tracking IsomiRs. Bioinformatics 32(13): 2069-2071. (IF=7.307) [pubmed][PDF]

19. Xu, B.#*, Y. W. Zhang#, S. X. Zheng#, X. H. Tong and Y. S. Liu (2016). Expression Profile of microRNAs and Their Targeted Pathways in Human Ovaries Detected by Next-Generation Small RNA Sequencing. DNA Cell Biol 35(5): 226-234. (IF=10.162)(IF=2.236) [pubmed][PDF]

2015

18. Zhang, Y.#, Z. Yu#, R. Ban#, H. Zhang#, F. Iqbal, A. Zhao, A. Li* and Q. Shi* (2015). DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data. Nucleic Acids Res 43(W1): W289-294. (IF=10.162) [pubmed][PDF]

17. Zhang, L.#, P. Wei#, X. Shen#, Y. Zhang, B. Xu, J. Zhou, S. Fan, Z. Hao, H. Shi, X. Zhang, R. Kong, L. Xu, J. Gao, D. Zou* and C. Liang* (2015). MicroRNA Expression Profile in Penile Cancer Revealed by Next-Generation Small RNA Sequencing. PLoS One 10(7): e0131336. (IF=2.806) [pubmed][PDF]

16. Xu, B.#*, Y. W. Zhang#, X. H. Tong and Y. S. Liu (2015). Characterization of microRNA profile in human cumulus granulosa cells: Identification of microRNAs that regulate Notch signaling and are associated with PCOS. Mol Cell Endocrinol 404(C): 26-36. (IF=3.754) [pubmed][PDF]

15. Wang, L.#, Z. Xu#, F. Iqbal, L. Zhong, Y. Zhang, C. Wu, G. Zhou, H. Jiang, I. Bukhari, H. J. Cooke and Q. Shi* (2015). Decreased XY recombination and disturbed meiotic prophase I progression in an infertile 48, XYY, +sSMC man. Chromosome Res 23(2): 267-276. (IF=2.385) [pubmed][PDF]

14. Wang, L. #, F. Iqbal*, G. Li, X. Jiang, I. Bukhari, H. Jiang, Q. Yang, L. Zhong, Y. Zhang, J. Hua, H. J. Cooke and Q. Shi* (2015). Abnormal meiotic recombination with complex chromosomal rearrangement in an azoospermic man. Reprod Biomed Online 30(6): 651-658. (IF=3.249) [pubmed][PDF]

13. Jiang, X.#, T. Ma#, Y. Zhang, H. Zhang, S. Yin, W. Zheng, L. Wang, Z. Wang, M. Khan, S. W. Sheikh, I. Bukhari, F. Iqbal, H. J. Cooke and Q. Shi* (2015). Specific deletion of Cdh2 in Sertoli cells leads to altered meiotic progression and subfertility of mice. Biol Reprod 92(3): 79. (IF=3.432) [pubmed][PDF]

12. Hua, J.#, B. Xu#, Y. Yang, R. Ban, F. Iqbal, H. J. Cooke, Y. Zhang* and Q. Shi* (2015). Follicle Online: an integrated database of follicle assembly, development and ovulation. Database (Oxford) 2015: bav036. (IF=3.290) [pubmed][PDF]

2014

11. Zhang, H.#, X. Jiang#, Y. Zhang, B. Xu, J. Hua, T. Ma, W. Zheng, R. Sun, W. Shen, H. J. Cooke, Q. Hao, J. Qiao and Q. Shi* (2014). microRNA 376a regulates follicle assembly by targeting Pcna in fetal and neonatal mouse ovaries. Reproduction 148(1): 43-54. (IF=3.100) [pubmed][PDF]

10. Yao, Y.#, L. Ma, Q. Jia, W. Deng, Z. Liu, Y. Zhang, J. Ren, Y. Xue, H. Jia* and Q. Yang* (2014). Systematic characterization of small RNAome during zebrafish early developmental stages. BMC Genomics 15: 117. (IF=3.729) [pubmed][PDF]

9. Wang, Z.#, H. Yin, Y. Zhang, Y. Feng, Z. Yan, X. Jiang, I. Bukhari, F. Iqbal, H. J. Cooke and Q. Shi* (2014). miR-214-mediated downregulation of RNF8 induces chromosomal instability in ovarian cancer cells. Cell Cycle 13(22): 3519-3528. (IF=3.530) [pubmed]

8. Tong, X. H.#, B. Xu#, Y. W. Zhang, Y. S. Liu and C. H. Ma* (2014). Research resources: comparative microRNA profiles in human corona radiata cells and cumulus oophorus cells detected by next-generation small RNA sequencing. PLoS One 9(9): e106706. (IF=2.806) [pubmed][PDF]

7. Jiang, X.#, H. Zhang#, S. Yin, Y. Zhang, W. Yang, W. Zheng, L. Wang, Z. Wang, I. Bukhari, H. J. Cooke, F. Iqbal and Q. Shi* (2014). Specific deficiency of Plzf paralog, Zbtb20, in Sertoli cells does not affect spermatogenesis and fertility in mice. Sci Rep 4: 7062. (IF=4.259) [pubmed][PDF]

2013

6. Zhang, Y.#, L. Zhong#, B. Xu#, Y. Yang#, R. Ban, J. Zhu, H. J. Cooke, Q. Hao and Q. Shi* (2013). SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining. Nucleic Acids Res 41(Database issue): D1055-1062. (IF=10.162) [pubmed][PDF]

5. Yang, Q.#, J. Hua#, L. Wang, B. Xu, H. Zhang, N. Ye, Z. Zhang, D. Yu, H. J. Cooke, Y. Zhang* and Q. Shi* (2013). MicroRNA and piRNA profiles in normal human testis detected by next generation sequencing. PLoS One 8(6): e66809. (IF=2.806) [pubmed][PDF]

2012

4. Zhang, Y.#, B. Xu#, Y. Yang, R. Ban, H. Zhang, X. Jiang, H. J. Cooke, Y. Xue* and Q. Shi* (2012). CPSS: a computational platform for the analysis of small RNA deep sequencing data. Bioinformatics 28(14): 1925-1927. (IF=7.307) [pubmed][PDF]

3. Chen, D.#, Y. Zhang, Q. Yi, Y. Huang, H. Hou, Y. Zhang, Q. Hao, H. J. Cooke, L. Li, Q. Sun and Q. Shi* (2012). Regulation of asymmetrical cytokinesis by cAMP during meiosis I in mouse oocytes. PLoS One 7(1): e29735.(IF=2.806) [pubmed][PDF]

2011

2. Zhang, Y.#, Y. Yang#, H. Zhang#, X. Jiang#, B. Xu, Y. Xue, Y. Cao, Q. Zhai, Y. Zhai, M. Xu, H. J. Cooke and Q. Shi* (2011). Prediction of novel pre-microRNAs with high accuracy through boosting and SVM. Bioinformatics 27(10): 1436-1437. (IF=7.307) [pubmed][PDF]

1. Xu, B.#, J. Hua#, Y. Zhang, X. Jiang, H. Zhang, T. Ma, W. Zheng, R. Sun, W. Shen, J. Sha, H. J. Cooke and Q. Shi* (2011). Proliferating cell nuclear antigen (PCNA) regulates primordial follicle assembly by promoting apoptosis of oocytes in fetal and neonatal mouse ovaries. PLoS One 6(1): e16046. (IF=2.806) [pubmed][PDF]